def model GLUT2_BG as def import using "./units.cellml" for unit fmol using unit fmol; unit J_per_K_mol using unit J_per_K_mol; unit fmol_per_s using unit fmol_per_s; unit J_per_mol using unit J_per_mol; unit per_fmol using unit per_fmol; enddef; def import using "params_BG.cellml" for comp params_BG using comp params_BG; enddef; def comp GLUT2_BG as var t: second; var R: J_per_K_mol{ pub: in}; var T: kelvin{ pub: in}; var K_Ai: per_fmol{ pub: in}; var q_init_Ai: fmol{ pub: in}; var K_Ao: per_fmol{ pub: in}; var q_init_Ao: fmol{ pub: in}; var K_1: per_fmol{ pub: in}; var q_init_1: fmol{ pub: in}; var K_2: per_fmol{ pub: in}; var q_init_2: fmol{ pub: in}; var K_3: per_fmol{ pub: in}; var q_init_3: fmol{ pub: in}; var K_4: per_fmol{ pub: in}; var q_init_4: fmol{ pub: in}; var kappa_r1: fmol_per_s{ pub: in}; var kappa_r2: fmol_per_s{ pub: in}; var kappa_r3: fmol_per_s{ pub: in}; var kappa_r4: fmol_per_s{ pub: in}; var mu_Ai: J_per_mol; var v_Ai: fmol_per_s; var mu_Ao: J_per_mol; var v_Ao: fmol_per_s; var mu_1: J_per_mol; var v_1: fmol_per_s; var mu_2: J_per_mol; var v_2: fmol_per_s; var mu_3: J_per_mol; var v_3: fmol_per_s; var mu_4: J_per_mol; var v_4: fmol_per_s; var A_f_r1: J_per_mol; var v_r1: fmol_per_s; var A_r_r1: J_per_mol; var A_f_r2: J_per_mol; var v_r2: fmol_per_s; var A_r_r2: J_per_mol; var A_f_r3: J_per_mol; var v_r3: fmol_per_s; var A_r_r3: J_per_mol; var A_f_r4: J_per_mol; var v_r4: fmol_per_s; var A_r_r4: J_per_mol; var q_Ai: fmol{ init: q_init_Ai}; var q_Ao: fmol{ init: q_init_Ao}; var q_1: fmol{ init: q_init_1}; var q_2: fmol{ init: q_init_2}; var q_3: fmol{ init: q_init_3}; var q_4: fmol{ init: q_init_4}; mu_Ai = R*T*ln(K_Ai*q_Ai); ode(q_Ai,t) = v_Ai; mu_Ao = R*T*ln(K_Ao*q_Ao); ode(q_Ao,t) = v_Ao; mu_1 = R*T*ln(K_1*q_1); ode(q_1,t) = v_1; mu_2 = R*T*ln(K_2*q_2); ode(q_2,t) = v_2; mu_3 = R*T*ln(K_3*q_3); ode(q_3,t) = v_3; mu_4 = R*T*ln(K_4*q_4); ode(q_4,t) = v_4; v_r1 = kappa_r1*(exp(A_f_r1/(R*T)) - exp(A_r_r1/(R*T))); v_r2 = kappa_r2*(exp(A_f_r2/(R*T)) - exp(A_r_r2/(R*T))); v_r3 = kappa_r3*(exp(A_f_r3/(R*T)) - exp(A_r_r3/(R*T))); v_r4 = kappa_r4*(exp(A_f_r4/(R*T)) - exp(A_r_r4/(R*T))); v_Ai = v_r4; v_Ao = - v_r3; v_1 = v_r1 - v_r3; v_2 = v_r3 - v_r2; v_3 = v_r2 - v_r4; v_4 = v_r4 - v_r1; A_f_r1 = mu_4; A_r_r1 = mu_1; A_f_r2 = mu_2; A_r_r2 = mu_3; A_f_r3 = mu_Ao+mu_1; A_r_r3 = mu_2; A_f_r4 = mu_3; A_r_r4 = mu_Ai+mu_4; enddef; def map between params_BG and GLUT2_BG for vars R and R; vars T and T; vars K_Ai and K_Ai; vars q_init_Ai and q_init_Ai; vars K_Ao and K_Ao; vars q_init_Ao and q_init_Ao; vars K_1 and K_1; vars q_init_1 and q_init_1; vars K_2 and K_2; vars q_init_2 and q_init_2; vars K_3 and K_3; vars q_init_3 and q_init_3; vars K_4 and K_4; vars q_init_4 and q_init_4; vars kappa_r1 and kappa_r1; vars kappa_r2 and kappa_r2; vars kappa_r3 and kappa_r3; vars kappa_r4 and kappa_r4; enddef; enddef;